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Topic: Homologous



  
 Spontaneous Homologous Recombination Is Induced by Collapsed Replication Forks That Are Caused by Endogenous DNA ...
collapsed forks correlated with an increase in homologous recombination.
forks may still be common substrates for homologous recombination.
the substrates or repair pathways for homologous recombination
http://mcb.asm.org/cgi/content/full/25/16/7158   (6449 words)

  
 Sloan-Kettering - Homologous Recombination as a Safeguard Against Tumorigenesis
They exhibit no significant homology with each other, and there are no clear homologs identified in easily manipulated model organisms, such as yeast.
The mouse homologs of BRCA1 and BRCA2 (Brca1 and Brca2) share 58 percent and 59 percent identity with their human counterparts, respectively.
Direct Evidence for a Role for BRCA1 in Homologous Recombination
http://www.mskcc.org/mskcc/html/10571.cfm   (428 words)

  
 Chromosome Pairing Does Not Contribute to Nuclear Architecture in Vegetative Yeast Cells -- Lorenz et al. 2 (5): 856 -- ...
Assessment of the influence of the Rabl orientation on the preferential association of homologous loci.
Homologous associations under presporulation growth conditions and in meiosis.
homologous associations would be sufficiently robust to resist.
http://ec.asm.org/cgi/content/full/2/5/856   (6799 words)

  
 Evolutionary Genetics
Structures that are functionless in a species but homologous to a functioning structure in other species are particularly difficult to explain except under the theory of common descent.
It is also hard to make sense of the fact that homologous structures can be inefficient or even useless.
Nevertheless, if every organism were created independently, it is unclear why there would be so many homologies among certain organisms, while so few among others.
http://www.zoology.ubc.ca/~bio336/Bio336/Lectures/Lecture5/Overheads.html   (1572 words)

  
 Curious Minds - Articles - Biology & Life - Evolution
Vertebrate limbs are a common example of such homologous structures.
A vestigial organ or structure may exist with little or no purpose in one organism, though they have a clear purpose in others.
Phylogeny, the study of the ancestry of species, has revealed that structures with similar internal organization may perform divergent functions.
http://www.curiousminds.co.uk/Evolution   (3678 words)

  
 Nuclear reorganization and homologous chromosome pairing during meiotic prophase require C. elegans chk-2 -- MacQueen ...
with homolog pairing suggest that it may serve to facilitate the
reorganization and homolog pairing and a later role in monitoring
and what their functional relationship is to homolog recognition
http://www.genesdev.org/cgi/content/full/15/13/1674   (7669 words)

  
 Homologous gene targeting in Caenorhabditis elegans by biolistic transformation -- Berezikov et al. 32 (4): e40 -- ...
homologous integrants as opposed to random integration of the
analysis confirmed the homologous recombination nature of the
a 3% frequency of homologous recombination among integrated
http://nar.oxfordjournals.org/cgi/content/full/32/4/e40   (3434 words)

  
 Homologous genetic recombination as an intrinsic dynamic property of a DNA structure induced by RecA/Rad51-family ...
The ability to induce homologous recombination in response
In experiments, homologous pairing to form a core heteroduplex
in various organisms suggest that homologous recombination through
http://www.pnas.org/cgi/content/full/98/15/8425   (5985 words)

  
 Learning Skills Program - The Principles Of Classification
Homologous organs are organs which show the same basic structure, the same general relationship to other organs, and the same pattern of very early growth.
Furthermore, all these appendages are found in the same part of the body and develop in similar ways.
It is based on the principle of homology.
http://www.coun.uvic.ca/learn/program/hndouts/class1.html   (617 words)

  
 Evolution and Systematics, p. 2
Characters change from one state to another through the process of evolution.
Suppose we tried to define human beings by the possession of hair.
Homoplastic characters can distort patterns of relationship indicated by homologous characters because they are often in conflict with them.
http://www.ucmp.berkeley.edu/education/events/carlson2.html   (1394 words)

  
 Homologous Recombination
This may be thought of as homologous recombination at non-homologous positions.
Understanding has been approached with each the genetic, morphological and molecular chromosomes.
Homologous (or general) recombination is at the heart of genetics.
http://opbs.okstate.edu/~melcher/MG/MGW3/MG35.html   (201 words)

  
 DNA replication meets genetic exchange: Chromosomal damage and its repair by homologous recombination -- Kuzminov 98 ...
is that there are two pathways in the yeast homologous recombination,
coli RecA and its human homologs Rad51 and Dmc1 rely on A:T
The ideas, that replication forks can falter whereas homologous recombination can repair faltering replication forks, are
http://www.pnas.org/cgi/content/full/98/15/8461   (5980 words)

  
 Double-Strand Break-Induced Recombination Between Ectopic Homologous Sequences in Somatic Plant Cells -- Puchta 152 ...
for homologous T-DNA integration can also be applied to the
Our previous analyses have focused on the repair of genomic
model being the major pathway of homologous DSB repair in plants
http://www.genetics.org/cgi/content/full/152/3/1173   (5173 words)

  
 Homolgous Recombination & Knockout Mouse
When an investigator wants to replace one allele with an engineered construct but not affect any other locus in the genome, then the method of choice is homologous recombination.
Mouse is good mammalian system but homologous recombination does not work as efficeintly in human cells.
The mechanism that performs this alignment is poorly understood but it does work better in some species than others.
http://www.bio.davidson.edu/courses/genomics/method/homolrecomb.html   (1036 words)

  
 The G-protein-coupled receptor kinase GRK4 mediates homologous desensitization of metabotropic glutamate receptor 1 -- ...
they mediate homologous desensitization of a variety of GPCRs.
In contrast, the expression of GRK1 and GRK4 is strictly localized,
The involvement of GRKs in the mechanism of homologous desensitization is
http://www.fasebj.org/cgi/content/full/14/15/2569   (6173 words)

  
 homologous - definition from Biology-Online.org
An example of this is the pendactyl limb, which can be found in many organisms, that have all evolved from one common ancestor.
Corresponding or similar in position or structure or function or characteristics; especially derived from an organism of the same species; "a homologous tissue graft".
Corresponding in structure, position, origin, etc., such as the feathers of a bird and the scales of a fish, the antigen and its specific antibody, the allelic chromosomes.
http://www.biology-online.org/dictionary/homologous   (115 words)

  
 Homology: A Concept in Crisis. Origins & Design 18:2. Wells, Jonathan
The neural tube, embryonic precursor of the spinal cord, is regarded as homologous throughout the chordates, yet in some its formation depends on induction by the underlying notochord while in others it does not.
Homology in some cases may or may not be due to inheritance from a common ancestor, but it is definitely not due to similarity of genes or similarity of developmental pathways.
Not only are non-homologous structures produced by organisms with supposedly homologous genes, but organisms with different genes can also produce similar structures.
http://www.arn.org/docs/odesign/od182/hobi182.htm   (3671 words)

  
 Gene Targeting via Homologous and Nonhomologous DNA Transformation
Are the non-homologous end-joining and homologous recombination pathways in competition and what genes are important for each pathway?
To address this question the genetic components of the end-joining pathway or homologous recombination pathways are being deleted and the strains are being tested for their effect on gene targeting
This low frequency of DNA integration by homologous recombination makes it exceeding difficult to carry out "reverse genetics" whereby mutations can be corrected or new mutations can be specifically introduced.
http://www.bio.brandeis.edu/haberlab/jehsite/gntarget.html   (382 words)

  
 Homologous Structures
Here we see considerable similarity in the basic skeletal organization of forearms of several types of vertebrates.
This Figure Illustrates Similarities Homologous Bone Arrangements in Several Vertebrates
http://tidepool.st.usm.edu/crswr/homologousstructs.html   (27 words)

  
 homologous : Definition
The structures or traits in their current forms may not necessarily perform the same functions in each organism, nor perform the functions it did in the common ancestor.
In Biology homologous may refer to two anatomical structures or behavioral traits within different organisms which originated from a structure or trait of their common ancestral organism.
An example: the wing of a bat, the fin of a whale and the arm of a man are homologous structures.
http://www.everythingbio.com/glos/definition.php?ID=3385   (175 words)

  
 Stimulation of Homologous Recombination through Targeted Cleavage by Chimeric Nucleases -- Bibikova et al. 21 (1): 289 ...
Site-specific recombination determined by I-SceI, a mitochondrial group I intron-encoded endonuclease expressed in the yeast nucleus.
a large capacity for homologous recombination that is readily
Richter (ed.), A comparative methods approach to the study of oocytes and embryos.
http://mcb.asm.org/cgi/content/full/21/1/289   (6650 words)

  
 [No title]
This is essentially a log during list processing, including all relationships encountered during processing.
HOMOLOGS A list of homologous chains is in file 'homologs.25', with percent identity, alignment length and Abagyan-distance given in column 3,4 and 5, resp.
If you feel this is too generous, let me know.
http://bioinfo.tg.fh-giessen.de/pdbselect/README   (1050 words)

  
 Isolation and Use of a Homologous Histone H4 Promoter and a Ribosomal DNA Region in a Transformation Vector for the ...
been expressed using a strong, homologous histone H4 promoter.
curvatus gpdA promoter in pAN-CCG with the homologous M.
We also report the need to include a homologous ribosomal DNA
http://aem.asm.org/cgi/content/full/66/11/4655   (4317 words)

  
 The Automatic Detection of Homologous Regions (ADHoRe) and Its Application to Microcolinearity Between Arabidopsis and ...
Detailed analysis showed that within this rice region
may be transferred to the homologous genes of the other genome.
chromosome 5 is characterized by five pairs of homologs (anchor
http://www.genome.org/cgi/content/full/12/11/1792   (6254 words)

  
 Homology (biology) - Wikipedia, the free encyclopedia
Asking whether two sequences are homologous is a yes-or-no question—there is no such condition as "degrees of homology." Sequence regions that are homologous may also be called conserved.
A pair of sequences that are orthologous to each other are called orthologs (see Orthologue), a pair that are paralogous are called paralogs.
This is a common problem in bioinformatics: when the genome of different species have been sequenced and homologous genes have been found, one can not immediately conclude that these genes have the same or similar function, as they could be paralogs whose function has diverged.
http://en.wikipedia.org/wiki/Homology_(biology)   (720 words)

  
 Evolution
The vestigial tailbone in humans is homologous to the functional tail of other primates.
Thus vestigial structures can be viewed as evidence for evolution: organisms having vestigial structures probably share a common ancestry with organisms in with organisms in which the homologous structure is functional.
Structures that are embryologically similar, but have different functions, are called homologous structures.
http://bioweb.cs.earlham.edu/9-12/evolution/HTML/live.html   (768 words)

  
 CB811: Homologous structures and genes
But although such cases are not explained, that does not mean they are unexplainable.
For example, some organs considered homologous arise from different layers of embryological tissues.
Thus homologous organs arising from different areas may result simply from mutations in where signalling proteins are expressed.
http://www.talkorigins.org/indexcc/CB/CB811.html   (232 words)

  
 Homologous competitive binding curves
The equation for specific binding is derived in Theory of homologous competition binding.
Homologous competition experiments only lead to useful results when the concentration of hot ligand is less than half the IC If
With some systems it is possible to determine K
http://www.graphpad.com/curvefit/homologous_.htm   (2542 words)

  
 EPA - Endocrine Homologous Models of Cognitive Development: Effects of Hypothyroidism
Homologous Models of Cognitive Development: Effects of Hypothyroidism
> Table2.EPA > Homologous Models of Cognitive Development: Effects of Hypothyroidism
Description: This project is designed to help address a high-priority research topic, endocrinedisruptors (Strategic Plan for ORD, U.S. EPA, May 1996, p.
http://www.epa.gov/endocrine/inventory/NTD-STAN.html   (371 words)

  
 Sloan-Kettering - Partner Choice in Homologous Recombination: Sister Chromatid Repair, LOH, and Translocations
(For homolog recombination, see Moynahan and Jasin, Proc.
For example, when homologs recombine, loss of heterozygosity (LOH) can result, in which information from one parental chromosome is replaced by information from the other parental chromosome.
We are currently determining the extent of LOH that occurs when homologs recombine and how frequently homolog recombination is associated with crossing-over.
http://www.mskcc.org/mskcc/html/10575.cfm   (376 words)

  
 Physics of RecA-Mediated Homologous Recognition -- Klapstein et al. 87 (3): 1466 -- Biophysical Journal
are homologously aligned, but this is not desirable.
These are shown only at their initial point of closest approach but may be of arbitrary length, e.g., region 1 may extend far to the left of what is shown.
probable it is that there is a point of homologous alignment.
http://www.biophysj.org/cgi/content/full/87/3/1466   (4948 words)

  
 Homologous Shoes?
FIRST: I start by introducing the basic concepts of Homology and Homologous Pairs.
They are very good at memorizing the phrase "Homologous Pairs", but they find it extremely difficult to visualize what they are and understand Homology's significance.
This outburst led to the "concept demonstration" that I do every year to help illustrate the concept of homology.
http://www.accessexcellence.org/AE/AEC/AEF/1994/carroll_homologous.html   (696 words)

  
 Organic Functional Groups and Homologous Series: A summary for GCE AS-A2 or US K12 subsiduary advanced level at Doc ...
The term 'functional' group is linked to the concept of a homologous series.
A homologous series is a group of molecules with the same general formula and the same functional group.
Organic Functional Groups and Homologous Series: A summary for GCE AS-A2 or US K12 subsiduary advanced level at Doc Brown's Chemistry Clinic.
http://www.wpbschoolhouse.btinternet.co.uk/page06/FunctionalGroups.htm   (893 words)

  
 Homologous definition - Medical Dictionary definitions of popular medical terms
Homologous: The relationship between two chromosomes that are paired and so are homologs of each other.
Homologous definition - Medical Dictionary definitions of popular medical terms
MedicineNet Home > MedTerms medical dictionary A-Z List > Homologous
http://www.medterms.com/script/main/art.asp?articlekey=3779   (139 words)

  
 [8] Homologous Recombination
During meiosis, two homologous pairs of sister chromatids align side by side.
(b) The two homologs are connected at a certain point called chiasma.
The DNA crossover is very likely to occur.
http://www.web-books.com/MoBio/Free/Ch8D1.htm   (85 words)

  
 Center News
Segmental maps were used to analyze homologous relationships across the vertebrates, and fine-scale DNA comparisons were used to identify slowly evolving regions.
The analysis included comparisons between human chromosome 16 and homologous chimpanzee, dog, mouse, rat, chicken, and fish (Fugu) sequences.
For example, a 450-kb inversion was found to exist between two haplotypes of one of the most extensively duplicated regions, containing genes for a subunit of eukaryotic translation initiation factor 3 (EIF3S8), sulphotransferase 1A, and Batten disease.
http://www-shgc.stanford.edu/news   (4206 words)

  
 HOVERGEN
Sequences and related information have been structured in an ACNUC database.
Homologous proteins are classified into families and multiple alignments and phylogenetic trees are computed for each family.
HOVERGEN is a database of homologous vertebrate genes, structured under ACNUC sequence database management system.
http://pbil.univ-lyon1.fr/databases/hovergen.html   (807 words)

  
 Gene Targeting by Homologous Recombination in Drosophila -- Rong and Golic 288 (5473): 2013 -- Science
Genetic Analysis of the ADGF Multigene Family by Homologous Recombination and Gene Conversion in Drosophila.
Stimulation of Homologous Recombination through Targeted Cleavage by Chimeric Nucleases.
Gene Targeting by Homologous Recombination in Drosophila -- Rong and Golic 288 (5473): 2013 -- Science
http://www.sciencemag.org/cgi/content/abstract/288/5473/2013   (1277 words)

  
 NodeWorks - Encyclopedia: Homologous series
Alkanes (paraffins), alkenes (olefins), and alkynes (acetylenes) form such series in which members differ in mass by 14, 12, and 10 atomic mass units respectively.
For example, the alkane homologous series begins with methane (CH4), ethane (C2H6), propane (C3H8), butane (C4H10), and pentane (C5H12), each member differing from the previous one by a CH2 group (or 14 atomic mass units).
For example, all the members of the alkane series differ by a relative atomic mass of 14.
http://pedia.nodeworks.com/H/HO/HOM/Homologous_series   (142 words)

  
 DNA Repair
Recombination between homologous chromosomes in meiosis I also involves the formation of DSBs and their repair.
This requires searching around in the nucleus for the homolog — a task sufficiently uncertain that G
Cells also use the MMR system to enhance the fidelity of recombination; i.e., assure that only homologous regions of two DNA molecules pair up to crossover and recombine segments (e.g., in meiosis).
http://users.rcn.com/jkimball.ma.ultranet/BiologyPages/D/DNArepair.html   (1889 words)

  
 Profile
Smith GR, Homologous recombination in E. coli: multiple pathways for multiple reasons, Cell, 58(5), 807-9, September 1989
Ennis DG, Amundsen SK, Smith GR, Genetic functions promoting homologous recombination in Escherichia coli: a study of inversions in phage lambda, Genetics, 115(1), 11-24, January 1987
Smith GR, Homologous recombination near and far from DNA breaks: alternative roles and contrasting views, Annual Review of Genetics, 35, 243-74, 2001
http://myprofile.cos.com/smithabc102   (3733 words)

  
 The Novel Gene HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS1 of Rice Encodes a Putative Coiled-Coil Protein Required ...
Experimental Farm/Plant Genetics Laboratory, National Institute of Genetics, Mishima, Shizuoka 411-8540, Japan
We have identified and characterized a novel gene, PAIR1 (HOMOLOGOUS
This article has been cited by other articles:
http://www.plantcell.org/cgi/content/abstract/16/4/1008   (412 words)

  
 Homologous chromosome - definition of Homologous chromosome in Encyclopedia
A homologous chromosome is one part of two genetically different chromosomes.
Each homologous chromosome is inherited from a different parent, (i.e.
Embed a dictionary search in your own web page
http://encyclopedia.laborlawtalk.com/Homologous_chromosome   (83 words)

  
 Homologous Recombination
Homologous recombination requires the a nick or break in dsDNA, invasion of a homologous dsDNA molecule by a ssDNA end, pairing of homologous sequences, branch migration to form a Holliday junction, and isomerization of the flanking sequences.
Early models proposed that only a limited amount of DNA synthesis is required for recombination.
http://www.sci.sdsu.edu/~smaloy/MicrobialGenetics/topics/genetic-analysis/recombination/rec-molecular.html   (246 words)

  
 A Mammalian Protein Homologous to Fructosamine-3-Kinase Is a Ketosamine-3-Kinase Acting on Psicosamines and ...
A Mammalian Protein Homologous to Fructosamine-3-Kinase Is a Ketosamine-3-Kinase Acting on Psicosamines and Ribulosamines but not on Fructosamines -- Collard et al.
http://diabetes.diabetesjournals.org/cgi/reprint/52/12/2888   (22 words)

  
 CPOS - Center for Polymers and Organic Solids
Heeger, AJ (Reprint); Wudl, F; Sariciftci, NS; Janssen, RAJ; Martin, N. Photoinduced Electron Transfer Between Conjugated Polymers And A Homologous Series Of TCNQ Derivatives.
http://www.cpos.ucsb.edu/publications.html   (5579 words)

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